PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299726.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 92aa    MW: 10430.8 Da    PI: 9.3627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299726.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.1e-0919591454
                    HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    d+i +  ++L++l+P++ + +s K+s + +L+++++YI+sL
  XP_021299726.1 19 DQITDLVSKLQQLIPELRGRRSDKVSASKVLQETCNYIRSL 59
                    6899999*********88*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSSRRSRSRQ SGVSRITDDQ ITDLVSKLQQ LIPELRGRRS DKVSASKVLQ ETCNYIRSLH  60
REVDDLSDRL SQLLASLDTD SDQAAIIRSL LM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.18e-40bHLH family protein