PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300257.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 125aa    MW: 14333.4 Da    PI: 9.9029
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.31e-11391073397
                     -SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
              B3  33 sktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                      ++  ++d+sg +W+++++   +++  + +l++GW +Fv+ +gL  +D v F+ + ++ s++e+++kv 
  XP_021300257.1  39 YVDFLVKDSSGGVWRFRCSTrlTGNHPKPYLSSGWLQFVRTKGLGINDKVHFYKEeDQgSGAEYRIKVE 107
                     4578899***********885555555599***********************6633357777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MHLIFTKSLT QTDIEKRLAV PTGSLPQLGF AKGREGYHYV DFLVKDSSGG VWRFRCSTRL  60
TGNHPKPYLS SGWLQFVRTK GLGINDKVHF YKEEDQGSGA EYRIKVERNM FPLFGHAIWV  120
DVEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.12e-06B3 family protein