PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300463.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 196aa    MW: 23232.5 Da    PI: 4.6951
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM371e-1155880128
             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                      gyW+++  +k++l+++++++g  +tL f+     k+++++++kt+W+mheyrl
  XP_021300463.1   5 GGYWRSSTAEKPILDEQQREIGFVRTLNFFefkdeKKSRKDATKTRWLMHEYRL 58 
                     79****************************8877656778889*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
VVDSGGYWRS STAEKPILDE QQREIGFVRT LNFFEFKDEK KSRKDATKTR WLMHEYRLPG  60
DTFQEWVICK IKDTSRSPYN EYSNSIWVKK LFGKLLLTHS DENHQHQDEY QSQIQSSTVF  120
NNENPSSYEV DQLLDDDLFK EVDQLLEIND DNRIQTQSST VSNDGNLSSY KVDQLLYVHE  180
KEISKDDDLL RKWNSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.12e-09NAC family protein