PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300468.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 155aa    MW: 16921.1 Da    PI: 7.0165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.1e-1753104156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr++   g+WvAeIr p  ng  kr +lg+f ta eAa a+++a+  ++ge
  XP_021300468.1  53 CNYRGVRQRT-CGKWVAEIRAP--NG-GKRLWLGTFPTACEAALAYDEAATTMYGE 104
                     56*****999.7*********9..33.5**********************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MDQNPEVRST LSSNDTLKLW SQNEEAKQLS KTPAKGATKG CMKGKGGPQN QSCNYRGVRQ  60
RTCGKWVAEI RAPNGGKRLW LGTFPTACEA ALAYDEAATT MYGENAILNM PQSKSEDHTG  120
SCFSLRQSCQ DDAVLSMKDL PLVECEWSLV IGAVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.19e-30ERF family protein