PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300854.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 218aa    MW: 25336.6 Da    PI: 7.5134
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR198.76.4e-3149137291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY++YA++vGF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+p
  XP_021300854.1  49 FYDAYATRVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHQLVP 137
                     9*******************************************99.9****************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDENPSIEEA ENETGQNSDG KELDTTEGTS DEEPYVGMEF ESEEAAKVFY DAYATRVGFI  60
MRVDAFRRSM RDGKVVWRRL VCNKEGFRKL RPRRSENRKP RAITREGCKA MIVVKKEKTG  120
KWVVTRFVKE HNHQLVPIPT SGRRSMLLSQ TPDEKDVKIR ELTAELQRER KRSAAFQEQL  180
DMVLQEMEEH SNQLSRNIDD IVQSVREIES KRVALSQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.15e-96FAR1 family protein