PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300855.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 181aa MW: 21336.6 Da PI: 10.7399

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	99.3	4.1e-31	12	100	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA++vGF +r+++ ++s r+g++++r++vC+keg+r+ + ++ +++r++ra tr gCka+++vkkek+gkw+vt++++eHnH+l+p XP_021300855.1 12 FYDAYATRVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRR-SENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHQLVP 100 9*****************************************99.9**************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MEFESEEAAK VFYDAYATRV GFIMRVDAFR RSMRDGKVVW RRLVCNKEGF RKLRPRRSEN 60 RKPRAITREG CKAMIVVKKE KTGKWVVTRF VKEHNHQLVP IPTSGRRSML LSQTPDEKDV 120 KIRELTAELQ RERKRSAAFQ EQLDMVLQEM EEHSNQLSRN IDDIVQSVRE IESKRVALSQ 180 S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-89	FAR1 family protein