PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300999.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 232aa    MW: 26039.4 Da    PI: 10.6859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-12109150351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_021300999.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150
                     79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MVSLRRRKLL GLCSGKSSFL TPLPRFFDNG HAPENSSQNA KSISVHPMPS DSIGHIHGKS  60
IAKVGSGSPN VSGSGSSKEH HNQPFPGQPI KRRKRHRRKH VQNQEPCLMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL SEEEKQELRK FKWDEFLAYT  180
RRSITNKKYK RRLGAGPQKR SEPAIENGDW DSKQGVNSLS ASEEAGPDSS AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-50ERF family protein