PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021301074.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 226aa    MW: 24687.3 Da    PI: 8.0868
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021301074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.19.3e-5726121297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl++yre+ege
  XP_021301074.1  26 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNRYRETEGE 120
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_021301074.1 121 K 121
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MTGKRNQTSS PIGSPSSGNI SDSSSKEQDR FLPIANVSRI MKKSLPANAK ISKEAKETVQ  60
ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF ENYVGPLKVY LNRYRETEGE  120
KNSMARQEDQ CAATNPAINH GGAIEFNKVN AAMSARGTDH FQGYGNGFFS LGAQGTHPHN  180
YEDGGRGIGY GESLMTAGAF NANRIRENGD GNGNRTMAAH LHRVDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.16e-64NF-YB family protein