PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635118.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 186aa    MW: 20720.4 Da    PI: 7.8946
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY216.96.1e-6721532170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     +++ +se+vCyv+CnfCntilavsvPs+ lf++vtvrCGhC++llsvn+a + q+ + ++                ++++l+s ++++++ s+s+
  XP_021635118.1   2 SLDLASERVCYVHCNFCNTILAVSVPSSNLFNIVTVRCGHCANLLSVNMAASLQTFPLQDP---------------QKMHLSSEDVNKDCGSSSE 81 
                     567799********************************************99999998884...............5566677777777777777 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +++   e+ d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl
  XP_021635118.1  82 KVTA-FESGDHEPPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 153
                     7766.46788999**999.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MSLDLASERV CYVHCNFCNT ILAVSVPSSN LFNIVTVRCG HCANLLSVNM AASLQTFPLQ  60
DPQKMHLSSE DVNKDCGSSS EKVTAFESGD HEPPRMPPIR PPEKRQRVPS AYNRFIKEEI  120
QRIKASNPDI SHREAFSTAA KNWAHFPHIH FGLKLDGNKH AKLDHQSFAG EGTQKSNGFY  180
EINGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.13e-78YABBY family protein