PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635282.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 850aa    MW: 93980.9 Da    PI: 6.5756
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.42.2e-171876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++  +++    +++ +q+kvWFqNrR +ek+
  XP_021635282.1 18 KYVRYTPEQVEALERLYHDCPKPSSIRRQQFIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                    5679*****************************************************97 PP
2START179.61.8e-561623702205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  XP_021635282.1 162 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELL 255
                     789*******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_021635282.1 256 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 350
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_021635282.1 351 ESSTVIAQKTTMAALRQLRQ 370
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MAMSCKDGKQ PANLDNGKYV RYTPEQVEAL ERLYHDCPKP SSIRRQQFIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKEA SRLQAVNRKL TAMNKLLMEE NDRLQKQVSQ LVYENGYFRQ  120
HTQNTTLATK DTSCESVVTS GQHHLTPQHP PRDASPAGLL SIAEETLTEF LSKATGTAVE  180
WVQMPGMKPG PDSIGIIAIS HGCTGVAARA CGLVGLEPTR VAEILKDRPS WFRDCRAVDV  240
LNVLPTANGG TIELLYMQLY APTTLAPARD FWLLRYTSVL EDGSLVICER SLKNTQNGPS  300
MPPVQHFVRA EMLPSGYLIR PCEGGGSIIH IVDHMDLEPW SVPEVLRPLY ESSTVIAQKT  360
TMAALRQLRQ IAQEVSQSNV TNWGRRPAAL RALSQRLSRG FNEALNGFTD EGWSMMGNDG  420
MDDVTILVNS SPEKLMGLNL SFTNGFPAVS NAVLCAKASM LLQNVPPAIL LRFLREHRSE  480
WADNNIDAYS AASIKVSPCS LPGSRVGSFG GQVILPLAHT IEHEEFLEVI KLEGVGHSPE  540
DPVMSRDMFL LQLCSGMDEN AVGTCAELIF APIDASFADD APLLPSGFRI IPLDSAKVFI  600
LMHYKIMQEA SSPNRTLDLA SALEIGPAGN KSSTDYSANS GCVRSVMTIA FEFAFESHMQ  660
DHVASMARQY VRSIISSVQR VALALSPSHL GLHAGLRPPL GTPEAQTLAR WICQSYRCYL  720
GVELLKSSSE GSETVLKTLW HHSDAIMCCS LKALPVFTFA NQAGLDMLET TLVALQDITL  780
EKIFDDHGRK TLCSEFPQIM QQGFACLQGG ICLSSMGRPV SYERAVAWKV LNEEETAHCV  840
CFMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.20.0HD-ZIP family protein