PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635423.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 233aa MW: 26012.7 Da PI: 6.8976

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.2	5.6e-38	11	112	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaC+++rrkCa+dC+lapyfp++++++f n+hklFG++n+lk+l++l +e+++a++s++y+A+arardPv+G++g+i++l+ q+e + el XP_021635423.1 11 ACAACRYQRRKCAPDCPLAPYFPSNHSSDFINAHKLFGVRNILKTLRKLrTFNEKKNAVTSMIYQANARARDPVSGCCGIISRLNAQIEMYQLEL 105 7**********************************************445669************************************ PP DUF260 95 allkeel 101 +l++++l XP_021635423.1 106 SLVNQQL 112 *9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MNPDTDTGSQ ACAACRYQRR KCAPDCPLAP YFPSNHSSDF INAHKLFGVR NILKTLRKLR 60 TFNEKKNAVT SMIYQANARA RDPVSGCCGI ISRLNAQIEM YQLELSLVNQ QLESHQQLTS 120 HHLQDFSQLN IDDDKQLQQL EDLSIVGNYQ PPHNYNSFDG IYDATQLHPI GFDQQQQQQQ 180 EEPNIVHGNY LPPHNYNSFG GPSVRIETKE SSSGHGGQPS SSGHGGQPSS STK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-36	LBD family protein