PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635448.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 222aa    MW: 25123.9 Da    PI: 8.5107
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY190.21e-584118623170
           YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekeesastsvsseklsenedeevprvpp 114
                      vsvP t+lfk+vtvrCGhCt+ll vn++      a + hl++s+  +   ll+e  + ++n+  n+++ +    + s+      +++e+pr+p 
  XP_021635448.1  41 QVSVPCTTLFKTVTVRCGHCTNLLPVNMRGLILPSANQFHLGHSFFSPshnLLDEIPNPSSNFLINQTNVN----DFSVPA-RGVTHDELPRPPV 130
                     79**************************99999999999*****988733355555555555555544444....334433.34556789**999 PP

           YABBY 115 virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  XP_021635448.1 131 INRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 186
                     ******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MLSSSFLSFL PLCMSFDHPI RYLCFLSSFL VLLLTFFDLW QVSVPCTTLF KTVTVRCGHC  60
TNLLPVNMRG LILPSANQFH LGHSFFSPSH NLLDEIPNPS SNFLINQTNV NDFSVPARGV  120
THDELPRPPV INRPPEKRQR VPSAYNRFIK DEIQRIKAGN PDISHREAFS AAAKNWAHFP  180
HIHFGLMPDQ TVKKTNVRQQ EGEDVLMKDG FFASANVGVS PY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-74YABBY family protein