PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635812.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 448aa    MW: 49766.6 Da    PI: 6.5098
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4163.3e-127484471373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn........sseelaal...... 81 
                     +++lL++cAe +s++d+++a++l++ ls ++sp+gd+ +Rl++ f++AL+ rl+ ++  + + l   ++++          ss +++a+      
  XP_021635812.1  48 MRQLLITCAELISQSDFSAAHRLISVLSANSSPYGDSRERLVHQFVKALSLRLNPHGAAMTRVLMNIANPSAAvggggggaSSVTASAVnvgsli 142
                     589****************************************************9999999885555554445888887655555555899999 PP

            GRAS  82 .............klfsevsPilkfshltaNqaIleave.geervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeel 158
                                    +++++P+++fshltaNqaIlea+e g++++HiiDfdi++G+QWp+L+qaLa+R+     +pp+lRiTg g+    + + l
  XP_021635812.1 143 treseeealqscyLSLNQITPFIRFSHLTANQAILEAIEvGQQAIHIIDFDIMHGVQWPPLMQALAERSsnniYPPPMLRITGTGH----DLNIL 233
                     999999988775334***********************95569**************************777777***********....9**** PP

            GRAS 159 eetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnses 252
                      +tg+rL kfA++lg++f+f++l + ++ ++  ++++ + p+EalaVn+vl lhrll+++       + +L+ +k l+Pkvv+++e+ea+hn++ 
  XP_021635812.1 234 DRTGDRLLKFAQSLGLKFQFHPLlLPNNDASSLPSAITLLPDEALAVNCVLYLHRLLKNDSRD---LRIFLHRIKALNPKVVTIAEREANHNHPF 325
                     **********************9533444444599*********************9544433...457************************** PP

            GRAS 253 FlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s 346
                     Fl+rfleale+y+alfdslea+lp++s+er  vE+ ++g+ei+++va+eg+errerhe++e+W++ l++aGF++vpls +a +qaklllr ++ s
  XP_021635812.1 326 FLQRFLEALEHYAALFDSLEATLPPNSRERLAVEQIWFGKEIMDIVAAEGEERRERHERFESWEMILRSAGFTNVPLSPFALSQAKLLLRLHYpS 420
                     *********************************************************************************************** PP

            GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaW 373
                     +gy+++  ++s++lgW++++L+svS+W
  XP_021635812.1 421 EGYHLQILNNSFFLGWQNHALFSVSSW 447
                     *************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MLGSLNSSSS HDQEEEEAID LQYQLMPRAS PVASGGTTSG FTSSANHMRQ LLITCAELIS  60
QSDFSAAHRL ISVLSANSSP YGDSRERLVH QFVKALSLRL NPHGAAMTRV LMNIANPSAA  120
VGGGGGGASS VTASAVNVGS LITRESEEEA LQSCYLSLNQ ITPFIRFSHL TANQAILEAI  180
EVGQQAIHII DFDIMHGVQW PPLMQALAER SSNNIYPPPM LRITGTGHDL NILDRTGDRL  240
LKFAQSLGLK FQFHPLLLPN NDASSLPSAI TLLPDEALAV NCVLYLHRLL KNDSRDLRIF  300
LHRIKALNPK VVTIAEREAN HNHPFFLQRF LEALEHYAAL FDSLEATLPP NSRERLAVEQ  360
IWFGKEIMDI VAAEGEERRE RHERFESWEM ILRSAGFTNV PLSPFALSQA KLLLRLHYPS  420
EGYHLQILNN SFFLGWQNHA LFSVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-132GRAS family protein