PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635824.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 725aa    MW: 79983.8 Da    PI: 5.8725
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.61.4e-2057112156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_021635824.1  57 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 112
                     688999***********************************************998 PP
2START207.26.5e-652464651206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el+++a+a+ep+Wv      e +n++e+l+ f+++ +      ++ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tle
  XP_021635824.1 246 ELAVAAMEELMRMAQAGEPLWVPGEnstEVLNEEEYLRAFPRGIGprplgLRSEASRESVVVIMNHINLVEILMDVN-QWSTVFCgivsRAMTLE 339
                     57899*****************98888899************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                      +s+g      galq+m+ae+q++splvp R+ +fvRy++q+ +g+w++vdvS+d+ +  p    + R++++pSg++i++++ng+skv+wveh++
  XP_021635824.1 340 ILSTGvagnynGALQVMTAEFQVPSPLVPtRENYFVRYCKQHVDGTWAVVDVSLDNLRGSP----ISRSRRRPSGCVIQELPNGYSKVIWVEHIE 430
                     ***********************************************************99....69**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r++h+++ +lv sgla+gak+wv  l+rqce+
  XP_021635824.1 431 VDDRSVHSIYSQLVTSGLAFGAKRWVGILDRQCER 465
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
MFQPNMFESR HMFDMTVKSP ENDLEKLKDD DFETKSGTEV TEAPSGDDQD PNQRPKKKRY  60
HRHTQHQIQE MEAFFKECPH PDDKQRKELS RELGLEPLQV KFWFQNKRTQ MKAQHERTEN  120
AILKAENEKL RSENNRYKEA LSNASCPNCG GPAALGEMSF DEQHLRIENV RLREEIDRLS  180
GIAAKYMGKP LSSLSHLSPH LRSRSLDLGV SNLGAQSGYV GEMYGAIDIL RSITGPTEAE  240
KPMIVELAVA AMEELMRMAQ AGEPLWVPGE NSTEVLNEEE YLRAFPRGIG PRPLGLRSEA  300
SRESVVVIMN HINLVEILMD VNQWSTVFCG IVSRAMTLEI LSTGVAGNYN GALQVMTAEF  360
QVPSPLVPTR ENYFVRYCKQ HVDGTWAVVD VSLDNLRGSP ISRSRRRPSG CVIQELPNGY  420
SKVIWVEHIE VDDRSVHSIY SQLVTSGLAF GAKRWVGILD RQCERLASSM AINIPAGDLC  480
VITSPEGRKS MLKLAERMVM SFCSGVGAST AHAWTTLSPT GSDDVRVMTR KSMDDPGRPP  540
GIVLSAATSF WIPVPPKRVF AFLSDENHRS EWDILSNGGQ IQEMAHIANG RDPGNCVSLL  600
RVNSANSNQS NMLILQESCT DSTGSYVIYA PVDIAAMNIV LSGGDPDYVA LLPSGFAILP  660
DGPGFNPGGI HDVRSGGALL TVAFQILVDS VPTAKLSLGS VATVNNLIKC TVERIKTAVT  720
SENDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein