PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635859.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 211aa    MW: 23593.8 Da    PI: 8.4879
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635859.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601253.6e-39111121101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC++dC++apyf +eq p +fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l
  XP_021635859.1  11 PCGACKFLRRKCVSDCIFAPYFRSEQgPDRFAAIHKVFGASNVSKLLLHVPIADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQL 105
                     7***********************9999******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k++l
  XP_021635859.1 106 MQVKAQL 112
                     *999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MASSGSSSRS PCGACKFLRR KCVSDCIFAP YFRSEQGPDR FAAIHKVFGA SNVSKLLLHV  60
PIADRCEAVV TIAYEAQARI RDPVYGCVAH IFALQQQVAC LQAQLMQVKA QLAQNLVDSS  120
RNRENQWQGN NNYGVPSSFP GNHPAYNCMM NPISPQISLE SVDHNNDGFI SMQDIIQSSR  180
EDFAFQSCTK RRPYNPDLGE LQTLKLRMMR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.17e-61LBD family protein