PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635903.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 279aa MW: 31468.8 Da PI: 9.446

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll+++++ G g+W++ +++ g+ R++k+c++rw +yl XP_021635903.1 14 RGPWTPREDTLLIKYIEARGEGNWRSLPKKAGLLRCGKSCRLRWMNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	52.4	1.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E++l+++ +++lG++ W++Ia +++ gRt++++k++w+++l XP_021635903.1 67 RGNITSDEEDLIIRMHALLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 112 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MGRAPCCSKV GLHRGPWTPR EDTLLIKYIE ARGEGNWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TSDEEDLIIR MHALLGNRWS LIAGRLPGRT DNEIKNHWNT HLSKRLRSQG 120 TDPNTHKKLA EPVQQEGNKR KSNKGTSNNK KRKKSKVKVE SLKPKIHLPK PVRFSSLALP 180 RNESFECNTS LSSSTGADGG LSADAVVDNS WCNFKDGDDG ISFLVGDVEH DIVNGTDIEC 240 QTLLPTENHL EKLYDEYLQL LKTDDDQVKL DSFAESLLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	154	KRKSNKGTSNNKKRKK
2	150	154	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-69	MYB family protein