PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021636350.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 179aa    MW: 19614.2 Da    PI: 10.6194
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021636350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA91.31.3e-281067158
       CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                    d p++VN+KQy++I++RR++Rak+   e+k  +k+rkpy+h SRh hA+rRpRg+gGrF
  XP_021636350.1 10 DGPIFVNPKQYHGIIRRRKTRAKAVLlENKS-TKKRKPYMHLSRHLHAMRRPRGTGGRF 67
                    57*********************99856666.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MLPMNMTTDD GPIFVNPKQY HGIIRRRKTR AKAVLLENKS TKKRKPYMHL SRHLHAMRRP  60
RGTGGRFLNT KTSDNGIGEI EAKKDGGVKI SQPTGSQSSE VLQSDSGTLN SSKEANGGGS  120
NLSGSEVTST YTRRDLDHFS INHLASPVQS FSVMMDSGHN NVMPSKWVAA ADNCCNLKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12544RRRKTRAKAVLLENKSTKKR
22545RRRKTRAKAVLLENKSTKKRK
32645RRRKTRAKAVLLENKSTKKR
42646RRRKTRAKAVLLENKSTKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.17e-50NF-YA family protein