PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636577.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 477aa MW: 52079.3 Da PI: 9.1816

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	57	77	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_021636577.1 57 CEICGKGFQRDQNLQLHRRGH 77 *******************88 PP
2	zf-C2H2	12.8	0.00035	131	153	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_021636577.1 131 WKCDKCSKRYAVQSDWKAHSKTC 153 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MAEEAISGNG GFVQNPVSGS NLPAVKKKRN LPGTPDPEAE VIALSPKTLM ATNRFLCEIC 60 GKGFQRDQNL QLHRRGHNLP WKLKQRTTKE VRKRVYVCPE KTCVHHHPSR ALGDLTGIKK 120 HFCRKHGEKK WKCDKCSKRY AVQSDWKAHS KTCGTREYKC DCGTLFSRRD SFITHRAFCD 180 ALAEETARVN AASNGLAAVS TNFNYHHLMG TTPVGPNMAQ HFSSVFKPIS SNDQTMDRSR 240 RGLSLWVSQG PQVHHEVIGG NNSIQEIHQI GSTGSSGAIF GDPLFSSSNP SPSDHFQLNW 300 PFFGNKLLSS CNGHEQLTSN DSLPLNNAKE AAAAVQLVTV PSLYSNQQQS HQTTSANMSA 360 TALLQKAAQI GATSTDPSFL GSFGLKYSSN STQVQEGNKY CGLMYGSNPV STSTNLASDD 420 TAGNDISSLN HQLQMYPTAK RQKIQSDQDS AGGQTRDFLG VGVQQAICHP STINGWI

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MAEEAISGNG GFVQNPVSGS NLPAVKKKRN LPGTPDPEAE VIALSPKTLM ATNRFLCEIC  60
GKGFQRDQNL QLHRRGHNLP WKLKQRTTKE VRKRVYVCPE KTCVHHHPSR ALGDLTGIKK  120
HFCRKHGEKK WKCDKCSKRY AVQSDWKAHS KTCGTREYKC DCGTLFSRRD SFITHRAFCD  180
ALAEETARVN AASNGLAAVS TNFNYHHLMG TTPVGPNMAQ HFSSVFKPIS SNDQTMDRSR  240
RGLSLWVSQG PQVHHEVIGG NNSIQEIHQI GSTGSSGAIF GDPLFSSSNP SPSDHFQLNW  300
PFFGNKLLSS CNGHEQLTSN DSLPLNNAKE AAAAVQLVTV PSLYSNQQQS HQTTSANMSA  360
TALLQKAAQI GATSTDPSFL GSFGLKYSSN STQVQEGNKY CGLMYGSNPV STSTNLASDD  420
TAGNDISSLN HQLQMYPTAK RQKIQSDQDS AGGQTRDFLG VGVQQAICHP STINGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-158	C2H2 family protein