PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636691.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 241aa MW: 27380.3 Da PI: 5.1771

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++l +++ +G g+W+ ++ g+ R++k+c++rw +yl XP_021636691.1 14 KGAWNQEEDDKLRAYIRAYGHGNWRELPKFAGLSRCGKSCRLRWVNYL 61 79********************************************97 PP
2	Myb_DNA-binding	60.2	4.6e-19	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++++eEd+l+++++++lG++ W+tIa ++ gRt++++k++w+++l XP_021636691.1 68 GNFSKEEDDLIIQLHQELGNK-WSTIATNLP-GRTDNEIKNHWHTHL 112 89*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MVRTTAVDKN GLKKGAWNQE EDDKLRAYIR AYGHGNWREL PKFAGLSRCG KSCRLRWVNY 60 LRPGVKHGNF SKEEDDLIIQ LHQELGNKWS TIATNLPGRT DNEIKNHWHT HLKRRGKQSQ 120 ASNVQAKEQS SETPESLISP CKKLEAADVA NNTPSLPIIL ESFPLSKESS DHSSLSAGVS 180 FVAEDSLTLM GIFEESGEDF WTQPFVGDNT YDQDDYTSSF ALYYDYNLDF FDQVLQELPD 240 N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKRRGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-55	MYB family protein