PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636724.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 784aa MW: 86334.2 Da PI: 7.4412

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.9	9.1e-19	240	339	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G + +L++gD+v+F++ + e++ XP_021636724.1 240 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISHPEGLPLKVQDSKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQNMRLQAGDTVTFSRLE-PEGK 332 89************************555666777***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_021636724.1 333 LVMGFRK 339 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
MACARKNVLL ASNSACLPSL FYNAPFSERL KDLSVKNWSQ LAGSGPVPWR QAPSLFNSSI 60 PHTELHPRTL YEIDRHNTGE RSSALSLEKG RIEDFSDRLI NGNLKLGTQD MLENGNAGNS 120 SEEKPGLCLG ISQQPSLKED PSTPQLGMAV PFASLNEPNG QIGGSGTPLR QPAPPLLAKQ 180 FHGNLHNGVS SSPDTQIRNG RPRADARGRS QLLPRYWPRF TDEELQQISG NSNSVITPLF 240 EKMLSASDAG RIGRLVLPKK CAEAYFPPIS HPEGLPLKVQ DSKGKEWVFQ FRFWPNNNSR 300 MYVLEGVTPC IQNMRLQAGD TVTFSRLEPE GKLVMGFRKA STAPSSDQDN DTSKTGNGVS 360 TNGDVELADP SPWSKVDKSG YIAKEVLEAK SSIRKRKNCT LGSKSKRLRI DNEDMIELKL 420 TWEEAQGLLR PPPDHFPSVV VIEGFEFEEY EDAPILGKPT ILATDNLGQK IQWVQCEDCF 480 KWRKLPANAL LHFKWTCSAN SWDPERSLCS AAQELTAEQF EDLLPTCNLA ASKKMKATKQ 540 EADNVEALEG LDTLANLAIL GENEALPTSS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK 600 QTCTCNVCQT VKRRFKTLMM KREKKQSEKE AETTRKKQQQ TLPEKLLDDD PSPSTNTGSS 660 SPNKKKVISD GYDDDPNKIK SSTSPFKGQI DLNIQPEREE ELSPGSDSGS MMKMIQDATE 720 RYLRQQRLSF DGDSISASNQ TLAGHGMGEK VSNGIMLGSS HQDSDKDHPA TFSMEVSASS 780 PATG

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

MACARKNVLL ASNSACLPSL FYNAPFSERL KDLSVKNWSQ LAGSGPVPWR QAPSLFNSSI  60
PHTELHPRTL YEIDRHNTGE RSSALSLEKG RIEDFSDRLI NGNLKLGTQD MLENGNAGNS  120
SEEKPGLCLG ISQQPSLKED PSTPQLGMAV PFASLNEPNG QIGGSGTPLR QPAPPLLAKQ  180
FHGNLHNGVS SSPDTQIRNG RPRADARGRS QLLPRYWPRF TDEELQQISG NSNSVITPLF  240
EKMLSASDAG RIGRLVLPKK CAEAYFPPIS HPEGLPLKVQ DSKGKEWVFQ FRFWPNNNSR  300
MYVLEGVTPC IQNMRLQAGD TVTFSRLEPE GKLVMGFRKA STAPSSDQDN DTSKTGNGVS  360
TNGDVELADP SPWSKVDKSG YIAKEVLEAK SSIRKRKNCT LGSKSKRLRI DNEDMIELKL  420
TWEEAQGLLR PPPDHFPSVV VIEGFEFEEY EDAPILGKPT ILATDNLGQK IQWVQCEDCF  480
KWRKLPANAL LHFKWTCSAN SWDPERSLCS AAQELTAEQF EDLLPTCNLA ASKKMKATKQ  540
EADNVEALEG LDTLANLAIL GENEALPTSS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK  600
QTCTCNVCQT VKRRFKTLMM KREKKQSEKE AETTRKKQQQ TLPEKLLDDD PSPSTNTGSS  660
SPNKKKVISD GYDDDPNKIK SSTSPFKGQI DLNIQPEREE ELSPGSDSGS MMKMIQDATE  720
RYLRQQRLSF DGDSISASNQ TLAGHGMGEK VSNGIMLGSS HQDSDKDHPA TFSMEVSASS  780
PATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-162	B3 family protein