PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021636879.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 446aa    MW: 49717.5 Da    PI: 6.8651
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021636879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS414.59.7e-127474451373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...........sseelaal... 81 
                     +++lL +cAe +s++d+++aq+l++ ls  +sp+gd+ +Rl++ f++AL+ rl+ ++  + + l   +++++                 ++    
  XP_021636879.1  47 MRQLLNTCAERISQSDFSAAQRLISVLSASSSPYGDSRERLVHQFVKALSLRLSPHGAAMGSVLMNITNPPSGgrgggggvtgvA----SSAinv 137
                     589****************************************************999999998665555555688888754331....222566 PP

            GRAS  82 ..............kl..fsevsPilkfshltaNqaIleave.geervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgsk 155
                                   ++  +++++P+++fshltaNqaIlea+e g++++HiiDfdi++G+QWpaL+qaLa+R+     +pp lRiTg g+    + 
  XP_021636879.1 138 gsliageseealqsCYlsLNQITPFIRFSHLTANQAILEAIEvGQQAIHIIDFDIMHGVQWPALMQALAERSsntlYPPPLLRITGTGH----DL 228
                     788888888877662256***********************95569**************************777778***********....9* PP

            GRAS 156 eeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhn 249
                     + l++tg+rL kfA++lg++f+f++l + ++ ++  ++++ + p+EalaVn+v+ lhrll+++       + +L+ +k l+Pkvv+++e+ea+hn
  XP_021636879.1 229 NILHRTGDRLFKFAQSLGLKFQFHPLlLLNNDHSSLPSAITLLPDEALAVNCVFYLHRLLKDDSRNL---RIFLHRIKALNPKVVTIAEREANHN 320
                     *************************964445555569***********************6655444...48*********************** PP

            GRAS 250 sesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                     ++ F +rfleal++y+alfdslea+lp++s+er  vE+ ++grei+++va+eg++rrerhe++e+W+++l++ GF++vpls +a +qaklllr +
  XP_021636879.1 321 HPFFIQRFLEALDHYTALFDSLEATLPPNSRERLAVEQTWFGREIMDIVAAEGEDRRERHERFESWEMMLRSIGFTNVPLSPFALSQAKLLLRLH 415
                     *********************************************************************************************** PP

            GRAS 345 k.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + s+gy+++  ++s++lgW++r+L+svS+W
  XP_021636879.1 416 YpSEGYHLQILNNSFFLGWQNRALFSVSSW 445
                     ****************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MLGSLNSSSH DQEEEEALDL RYQQIPQAPS VAPRGTTSGF TSSAIHMRQL LNTCAERISQ  60
SDFSAAQRLI SVLSASSSPY GDSRERLVHQ FVKALSLRLS PHGAAMGSVL MNITNPPSGG  120
RGGGGGVTGV ASSAINVGSL IAGESEEALQ SCYLSLNQIT PFIRFSHLTA NQAILEAIEV  180
GQQAIHIIDF DIMHGVQWPA LMQALAERSS NTLYPPPLLR ITGTGHDLNI LHRTGDRLFK  240
FAQSLGLKFQ FHPLLLLNND HSSLPSAITL LPDEALAVNC VFYLHRLLKD DSRNLRIFLH  300
RIKALNPKVV TIAEREANHN HPFFIQRFLE ALDHYTALFD SLEATLPPNS RERLAVEQTW  360
FGREIMDIVA AEGEDRRERH ERFESWEMML RSIGFTNVPL SPFALSQAKL LLRLHYPSEG  420
YHLQILNNSF FLGWQNRALF SVSSWH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119126GGRGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-143GRAS family protein