PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636886.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 271aa MW: 30874.2 Da PI: 4.3308

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.5	6.4e-20	66	119	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t eq++ Le+ F++++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_021636886.1 66 KKRRLTLEQVNLLEKSFQEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 119 56689************************************************9 PP
2	HD-ZIP_I/II	127.5	5.8e-41	65	156	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sF+ee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ ++ k++e+L++e+ XP_021636886.1 65 EKKRRLTLEQVNLLEKSFQEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKASYDSLLSNYDTAVKQNEKLKSEVV 156 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MESGRLFFNP SSCNGNMLFL RNCNPVFRGP RSSMLNMEDT SKKRPFFSSP EDLFDEEYYE 60 EQLPEKKRRL TLEQVNLLEK SFQEENKLEP ERKTQLAKKL GLQPRQVAVW FQNRRARWKT 120 KQLERDYDLL KASYDSLLSN YDTAVKQNEK LKSEVVSLTE KLEAKDVTGA LPQQNSDSLQ 180 VDIANACDVQ MGVKVEDRLS SGSTRSAVVD EDSPQLLDSG DSFFQNDNYG GCVIGGPGDS 240 VQSEEDDGSD DVFVTAGDQQ EEEPLPWWVW S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	122	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-96	HD-ZIP family protein