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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_021636894.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 262aa MW: 29815 Da PI: 4.3157 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 44.1 | 3.4e-14 | 75 | 110 | 21 | 56 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++ e++++LAkklgL+ rqV vWFqNrRa++k
XP_021636894.1 75 EENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 110
578999*****************************9 PP
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| 2 | HD-ZIP_I/II | 100.2 | 1.8e-32 | 74 | 147 | 19 | 92 |
HD-ZIP_I/II 19 eeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+ee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ ++ k++e+L++e+
XP_021636894.1 74 QEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKASYDSLLSNYDTAVKQNEKLKSEVV 147
3678******************************************************************9986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 262 aa Download sequence |
MESGRLFFNP SSCNGNMLFL RNCNPVFRGP RSSMLNMEDT SKKRPFFSSP EDLFDEEYYE 60 EQLPEKKRRL TLEQEENKLE PERKTQLAKK LGLQPRQVAV WFQNRRARWK TKQLERDYDL 120 LKASYDSLLS NYDTAVKQNE KLKSEVVSLT EKLEAKDVTG ALPQQNSDSL QVDIANACDV 180 QMGVKVEDRL SSGSTRSAVV DEDSPQLLDS GDSFFQNDNY GGCVIGGPGD SVQSEEDDGS 240 DDVFVTAGDQ QEEEPLPWWV WS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 105 | 113 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G01470.1 | 5e-88 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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