PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636927.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1734aa MW: 195566 Da PI: 5.8824

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r+eL++klgL++rq ++WF+ rR k+kk XP_021636927.1 31 RPKRQMKTPFQLEVLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKK 87 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1734 aa Download sequence
MEANSEGDYQ NTDGNDNNNN NVGNSNEGQS RPKRQMKTPF QLEVLEKAYA LETYPSEAMR 60 AELSQKLGLS DRQLQMWFCH RRLKDKKETP AKKPRKAVPL MESPVEEMRA VGTEPGSDYG 120 SGSGSGSSPF MEPRKASLDD VSMMRRFYES SPQSVMELRA IACVEAQLGE PLREDGPILG 180 MEFDPLPPDA FGAPIAMVEH QKRSMHSYDG KVYERHDAKS SKASARAFHD FLQDSSIRSD 240 AYGQVAQSPY RDPPVDISRG KTSFVHEDEP LAKVQGARHL SQQDKRGQIF TSLHRDDDYP 300 VHHDFFTNNR ISAQSIAHPI AGSENADIFP NAQVFHTDTD LRIGKKRKND EARIAREVEA 360 HENQIRKELE KQDQLRRKSE ERMRKEMERH ERERRKEEER LMRERQREEE RSLREQKREL 420 ERREKFLQKE YLRAEKRRQK EELQREREAV KRQAAIEKAT ARRIAKESMD LIEDVQLELM 480 ELAAASKGQT SIVHLNYETL QNLDSFRDSL RMFPPESVQL KKPFAIQPWI DSEENIGNLL 540 MVWRFVITFA DVLGLWPFTL DEFVQAFHDY DSRLLGEVHV ALLKLIIKDI EDVARTPSTG 600 LGSNQYCSAN PEGGHLLIVE GAYMWGFDIR NWQRHLNPLT WPEIFRQLAL SAGFGPRLKK 660 RNSTRTYFGD NDEVKGCENT ISTLRNGSAA ENAFALMRER GLLLPRRSRH RLTPGTVKFA 720 AFHVLSLEGS KGLTVLELAD KIQKSGLRDL TTSKTPEASI SVALTRDQKL FERIAPSTYC 780 VRAAYRKDPA DGEAILSAAR KKIQVFENGF LGGEDADDAE RDEDSEGDVD EDPEVDDLAI 840 PLSATRSADK SSEANTCSGS GKNSICNGIP LIEQNEPVKE SSSVHLNGPK DAKTLSSVEQ 900 RVPHGDVGVR NIDQENIEID ESKSGESWIQ GLAEGEYAHL SVEERLNALV ALVGLANEGN 960 AIRSVLEDRL EAANALKKQM WAEAQSDRSR LKEDIVSALD FPSSIGGKAE MQVTISAVEG 1020 SQSPLPFVDS KNKEASPSTT GDQKPLLASG NVQNHLNSVP TEKTLMVQDL SMNPDNFASQ 1080 QHGYASKRSR SQLKAYIGHI AEETYVYRSL PLGQDRRRNR YWQFVASASK NDPCSGRIFV 1140 ELNDGNWRLI DCERAFDALL SSLDTRGIRE SHLRIMFQKI EKSFKENVRR NLQSEDIICQ 1200 NGTTAENEAG EADSSPNCSA GISSPSSMVC GSNLDTLDTF SFFRIELGRN EIEKKGAMKR 1260 YQDFQKWMWK ECFNSLTLCS MKYGKKRCSQ ILTTCDWCFD SFLTEDTHCD SCHQTFNAVN 1320 KSYNFSEHGV QCKVKRKLNH RICDASLPLG IRLLKALLAF IEVSVPPEGL ESFWMENHRK 1380 TWATKLNVSL STEELLQILT VLESAIKRDC LSADFETTKD LLSSSTSAQS ALYGSTDLRS 1440 VPVLPWIPKT TAAVALRLFE LDGSITYIQH EKVEPSEDKP VKVYMKLPSR YSLLKSKEVE 1500 RKRLKQSEHV KGDNVTDLRS KRNSKKRRRG GRDQGYGTKW QRRAPGLKSD ANRRNARETE 1560 KFNLGSKQGR KTNTQGSSRG RRTVRKRRAE MMVAEEALIG RMTNTVGPKN YGGSLRNLGK 1620 EDWGIEKVRM DVDDADNSNS MEAAESDDNV EADEYEQVNW DQSVNGASSR WNRNVLEVSD 1680 DDGDASGDDN GIEEMGAEES EGDVEISEGS EGVGNKIEND EGTDTADSDD YISD

Sequence ? help Back to Top

Protein Sequence Length: 1734 aa Download sequence

MEANSEGDYQ NTDGNDNNNN NVGNSNEGQS RPKRQMKTPF QLEVLEKAYA LETYPSEAMR  60
AELSQKLGLS DRQLQMWFCH RRLKDKKETP AKKPRKAVPL MESPVEEMRA VGTEPGSDYG  120
SGSGSGSSPF MEPRKASLDD VSMMRRFYES SPQSVMELRA IACVEAQLGE PLREDGPILG  180
MEFDPLPPDA FGAPIAMVEH QKRSMHSYDG KVYERHDAKS SKASARAFHD FLQDSSIRSD  240
AYGQVAQSPY RDPPVDISRG KTSFVHEDEP LAKVQGARHL SQQDKRGQIF TSLHRDDDYP  300
VHHDFFTNNR ISAQSIAHPI AGSENADIFP NAQVFHTDTD LRIGKKRKND EARIAREVEA  360
HENQIRKELE KQDQLRRKSE ERMRKEMERH ERERRKEEER LMRERQREEE RSLREQKREL  420
ERREKFLQKE YLRAEKRRQK EELQREREAV KRQAAIEKAT ARRIAKESMD LIEDVQLELM  480
ELAAASKGQT SIVHLNYETL QNLDSFRDSL RMFPPESVQL KKPFAIQPWI DSEENIGNLL  540
MVWRFVITFA DVLGLWPFTL DEFVQAFHDY DSRLLGEVHV ALLKLIIKDI EDVARTPSTG  600
LGSNQYCSAN PEGGHLLIVE GAYMWGFDIR NWQRHLNPLT WPEIFRQLAL SAGFGPRLKK  660
RNSTRTYFGD NDEVKGCENT ISTLRNGSAA ENAFALMRER GLLLPRRSRH RLTPGTVKFA  720
AFHVLSLEGS KGLTVLELAD KIQKSGLRDL TTSKTPEASI SVALTRDQKL FERIAPSTYC  780
VRAAYRKDPA DGEAILSAAR KKIQVFENGF LGGEDADDAE RDEDSEGDVD EDPEVDDLAI  840
PLSATRSADK SSEANTCSGS GKNSICNGIP LIEQNEPVKE SSSVHLNGPK DAKTLSSVEQ  900
RVPHGDVGVR NIDQENIEID ESKSGESWIQ GLAEGEYAHL SVEERLNALV ALVGLANEGN  960
AIRSVLEDRL EAANALKKQM WAEAQSDRSR LKEDIVSALD FPSSIGGKAE MQVTISAVEG  1020
SQSPLPFVDS KNKEASPSTT GDQKPLLASG NVQNHLNSVP TEKTLMVQDL SMNPDNFASQ  1080
QHGYASKRSR SQLKAYIGHI AEETYVYRSL PLGQDRRRNR YWQFVASASK NDPCSGRIFV  1140
ELNDGNWRLI DCERAFDALL SSLDTRGIRE SHLRIMFQKI EKSFKENVRR NLQSEDIICQ  1200
NGTTAENEAG EADSSPNCSA GISSPSSMVC GSNLDTLDTF SFFRIELGRN EIEKKGAMKR  1260
YQDFQKWMWK ECFNSLTLCS MKYGKKRCSQ ILTTCDWCFD SFLTEDTHCD SCHQTFNAVN  1320
KSYNFSEHGV QCKVKRKLNH RICDASLPLG IRLLKALLAF IEVSVPPEGL ESFWMENHRK  1380
TWATKLNVSL STEELLQILT VLESAIKRDC LSADFETTKD LLSSSTSAQS ALYGSTDLRS  1440
VPVLPWIPKT TAAVALRLFE LDGSITYIQH EKVEPSEDKP VKVYMKLPSR YSLLKSKEVE  1500
RKRLKQSEHV KGDNVTDLRS KRNSKKRRRG GRDQGYGTKW QRRAPGLKSD ANRRNARETE  1560
KFNLGSKQGR KTNTQGSSRG RRTVRKRRAE MMVAEEALIG RMTNTVGPKN YGGSLRNLGK  1620
EDWGIEKVRM DVDDADNSNS MEAAESDDNV EADEYEQVNW DQSVNGASSR WNRNVLEVSD  1680
DDGDASGDDN GIEEMGAEES EGDVEISEGS EGVGNKIEND EGTDTADSDD YISD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	88	RRLKDKKE
2	345	371	KKRKNDEARIAREVEAHENQIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein