PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637027.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 212aa MW: 24704.2 Da PI: 8.7767

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.9	6.5e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaevav+ifs++g+l e+ss XP_021637027.1 9 KRIENATSRQVTFSKRRKGLLKKAYELSVLCDAEVAVLIFSQKGRLCEFSS 59 79***********************************************96 PP
2	K-box	63	1.1e-21	82	172	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +e+ ++l e++ k+ie+L+ +qR++lG+dL s sl+eLq++ +qLeks++kiR++K+el++eqie+l+ ke+ l +en + r+k XP_021637027.1 82 DTEQYIQHLVSESTEKVKKIEQLEISQRKILGQDLASSSLEELQEMHSQLEKSISKIRARKDELFKEQIEKLKAKERLLLDENASYREKCS 172 5677789999999999999*****************************************************************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVRGKIEMKR IENATSRQVT FSKRRKGLLK KAYELSVLCD AEVAVLIFSQ KGRLCEFSSN 60 DMQKTIERYG KHAKEVQDDR VDTEQYIQHL VSESTEKVKK IEQLEISQRK ILGQDLASSS 120 LEELQEMHSQ LEKSISKIRA RKDELFKEQI EKLKAKERLL LDENASYREK CSEKPWPHPT 180 QQKEVDRYLS LSGKNSEVET QLSIGLPEPE RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	1e-79	MIKC_MADS family protein