PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637029.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 170aa    MW: 19890.9 Da    PI: 9.5915
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.54.3e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRr+g+lKKA+ELSvLCdaevav+ifs++g+l e+ss
  XP_021637029.1  9 KRIENATSRQVTFSKRRKGLLKKAYELSVLCDAEVAVLIFSQKGRLCEFSS 59
                    79***********************************************96 PP
2K-box63.48.2e-2282170997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                      +e+  ++l  e++   k+ie+L+ +qR++lG+dL s sl+eLq++ +qLeks++kiR++K+el++eqie+l+ ke+ l +en + r+k
  XP_021637029.1  82 DTEQYIQHLVSESTEKVKKIEQLEISQRKILGQDLASSSLEELQEMHSQLEKSISKIRARKDELFKEQIEKLKAKERLLLDENASYREK 170
                     567778999999999999*****************************************************************988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MVRGKIEMKR IENATSRQVT FSKRRKGLLK KAYELSVLCD AEVAVLIFSQ KGRLCEFSSN  60
DMQKTIERYG KHAKEVQDDR VDTEQYIQHL VSESTEKVKK IEQLEISQRK ILGQDLASSS  120
LEELQEMHSQ LEKSISKIRA RKDELFKEQI EKLKAKERLL LDENASYREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.38e-73MIKC_MADS family protein