PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637198.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 748aa MW: 85553.4 Da PI: 6.2754

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.6	1.4e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w+vt +++ HnHel XP_021637198.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQMKPSEDGKMQRNRKSSRCGCQAYMRIVKRAdfdVPEWRVTGFSNIHNHELL 152 6*************9998874556679***************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MSDGTSMVME SSENGTDISQ DDTGNMEEIP EDTILLRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QMKPSEDGKM QRNRKSSRCG 120 CQAYMRIVKR ADFDVPEWRV TGFSNIHNHE LLKSTEVHLL PAHCTISPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSIRNVN RDNDAIDLIA MCKKMKDEDH 240 NFKYDFKIDG NNRLEHISWS YASSVQLYEA FGDAVVFDTT NRLDAYDMIL GMWLGVDNHA 300 MTCFFGCVLL RDENMESFSW ALKAFVDFMN GKAPQTIMTD QNIWLKEAIA IEMPETKQAF 360 CIWHIIAKFS DWFSMLLGSC YDDWKAEFLR LYNLEFVEDF EEGWKEMVIK YGLHANKHIA 420 SLYALRTYWA LSYLRHYFFA GMMNTCQSES INAFIQRFLS AQSQLDCFVK RVAEIIDLSN 480 CTGVRAETQR KTQKVYLKTG SPIESQAASV LTPYAFNKLQ EELVLAPQYA SFPIDEYCYQ 540 VRHHTQVSGG CKVVWDPCQE HISCSCNQFE FLGILCRHVL RVLSTNNCFH IPDQFLPTRW 600 CDVSLSSNTR VHSERIQLLE SMVSTFVTES IETEERLDVA CEQIAMVLSH IKDLPRQTHC 660 ENAYNCPSES LILPNEGADG IVQTVAIGNP HDTISLGKLK ERRPRDGNDI SRKRRHYSGP 720 CCGQFGHDAS DCPIMGSDHL NGDELGYI

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MSDGTSMVME SSENGTDISQ DDTGNMEEIP EDTILLRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QMKPSEDGKM QRNRKSSRCG  120
CQAYMRIVKR ADFDVPEWRV TGFSNIHNHE LLKSTEVHLL PAHCTISPDD KSRICMFAKA  180
GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSIRNVN RDNDAIDLIA MCKKMKDEDH  240
NFKYDFKIDG NNRLEHISWS YASSVQLYEA FGDAVVFDTT NRLDAYDMIL GMWLGVDNHA  300
MTCFFGCVLL RDENMESFSW ALKAFVDFMN GKAPQTIMTD QNIWLKEAIA IEMPETKQAF  360
CIWHIIAKFS DWFSMLLGSC YDDWKAEFLR LYNLEFVEDF EEGWKEMVIK YGLHANKHIA  420
SLYALRTYWA LSYLRHYFFA GMMNTCQSES INAFIQRFLS AQSQLDCFVK RVAEIIDLSN  480
CTGVRAETQR KTQKVYLKTG SPIESQAASV LTPYAFNKLQ EELVLAPQYA SFPIDEYCYQ  540
VRHHTQVSGG CKVVWDPCQE HISCSCNQFE FLGILCRHVL RVLSTNNCFH IPDQFLPTRW  600
CDVSLSSNTR VHSERIQLLE SMVSTFVTES IETEERLDVA CEQIAMVLSH IKDLPRQTHC  660
ENAYNCPSES LILPNEGADG IVQTVAIGNP HDTISLGKLK ERRPRDGNDI SRKRRHYSGP  720
CCGQFGHDAS DCPIMGSDHL NGDELGYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein