PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637297.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 349aa MW: 38451.6 Da PI: 10.2199

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.4	1.2e-15	46	129	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L+ea+++++ +r+klk+++We+v++++ ++ ++++qCk+k+e+++kry+ + +++ s++p++ +l+ XP_021637297.1 46 EWSEGAVSSLLEAYESKWILRNRAKLKGHDWEDVARFVssraNCTKSPKTQTQCKNKIESMKKRYRSESATADA------SSWPLYPRLD 129 5***********************************854444555566679*************999986......4699999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDKETNQESP SLPSNNKEDP SRKQLSATGA GGFGGGAGGD RLKRDEWSEG AVSSLLEAYE 60 SKWILRNRAK LKGHDWEDVA RFVSSRANCT KSPKTQTQCK NKIESMKKRY RSESATADAS 120 SWPLYPRLDL LLRGSAAAVA VAPPPPPPPP QPQQQQQQPP SFQASNHPPP LMLLETSHVL 180 PQLPLQPPPP PPPPPPPPPS SVIGTAQHSH GSNGVDKGAK EDGVATKLSD HVSDKNAMDT 240 DSSTPALYSD KEKLRSKKLK MKMDKKKRRR EEWKIADSIR WLAEVVVRSE QARMDTMREV 300 EKMRIEAEAK RAEMDLKRTE IIANTQLEIA KLFAGVGKGV DSSLRIGRS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDKETNQESP SLPSNNKEDP SRKQLSATGA GGFGGGAGGD RLKRDEWSEG AVSSLLEAYE  60
SKWILRNRAK LKGHDWEDVA RFVSSRANCT KSPKTQTQCK NKIESMKKRY RSESATADAS  120
SWPLYPRLDL LLRGSAAAVA VAPPPPPPPP QPQQQQQQPP SFQASNHPPP LMLLETSHVL  180
PQLPLQPPPP PPPPPPPPPS SVIGTAQHSH GSNGVDKGAK EDGVATKLSD HVSDKNAMDT  240
DSSTPALYSD KEKLRSKKLK MKMDKKKRRR EEWKIADSIR WLAEVVVRSE QARMDTMREV  300
EKMRIEAEAK RAEMDLKRTE IIANTQLEIA KLFAGVGKGV DSSLRIGRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	268	KKLKMKMDKKKR
2	265	270	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	1e-100	Trihelix family protein