PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637487.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 398aa MW: 43828.9 Da PI: 8.1678

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.8	8e-18	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_021637487.1 57 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.1	2.9e-36	56	118	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_021637487.1 56 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 118 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MASSNRHWPS MFKSKPCNAH RHQWQHDITQ SSLVQTACHR TPYASVPGCE ERSPEPKPRW 60 NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKLR 120 HLQNSKQQTY QTPSVTTSIN TVTAPSSSSS SSEKSSPKGS KRTLSLSSPS VVDVSNSPTG 180 SVNQTYFQAH NEFVPEPFFF QAQQTGAGGG TRSFTQGYCF SDLSNLVQVQ DDTVGNLVQL 240 QDNTVGPCTG LLLSEIMSSE ASKKDLHHQD KNMKIQPYLS CPVTTTMSHS IGFAPSLPVP 300 TTNPNNVTVP STIRQIQGAA ESASVGSSGS LRSTVFIDDV AFEVGVGPFN LREAFGDDFV 360 LIHSSGQPVL TNEWGVTFHS LQHGASYYLV PLSMSEHI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MASSNRHWPS MFKSKPCNAH RHQWQHDITQ SSLVQTACHR TPYASVPGCE ERSPEPKPRW  60
NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKLR  120
HLQNSKQQTY QTPSVTTSIN TVTAPSSSSS SSEKSSPKGS KRTLSLSSPS VVDVSNSPTG  180
SVNQTYFQAH NEFVPEPFFF QAQQTGAGGG TRSFTQGYCF SDLSNLVQVQ DDTVGNLVQL  240
QDNTVGPCTG LLLSEIMSSE ASKKDLHHQD KNMKIQPYLS CPVTTTMSHS IGFAPSLPVP  300
TTNPNNVTVP STIRQIQGAA ESASVGSSGS LRSTVFIDDV AFEVGVGPFN LREAFGDDFV  360
LIHSSGQPVL TNEWGVTFHS LQHGASYYLV PLSMSEHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-64	WOX family protein