PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637557.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 252aa MW: 28063.8 Da PI: 8.2115

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	113.2	1.7e-35	11	110	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk+lr++Ca+dC+lap+fp++++++f n+hklFG+sn+lk+lk+l++ + +++a++s++y+A+arardP G++++i++l+ q+e + +l XP_021637557.1 11 ACAACKYLRKRCAADCPLAPHFPSNHSSDFLNAHKLFGVSNILKTLKKLHTFDeKKNAVKSMIYQANARARDPAGGCYRIITRLEDQIEIYQLQL 105 7**********************************************665449***********************************999 PP DUF260 95 allke 99 ++++ XP_021637557.1 106 TRARQ 110 98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MTASASAGSQ ACAACKYLRK RCAADCPLAP HFPSNHSSDF LNAHKLFGVS NILKTLKKLH 60 TFDEKKNAVK SMIYQANARA RDPAGGCYRI ITRLEDQIEI YQLQLTRARQ LIAFYQRLAS 120 HRLQVSPLNM YGTTTSTLQS ILCGQQQQEE SSFVNENYQT DGTIVKIDME KLAPSCLDGN 180 DSQPASSGKP LFAMDRSEDI KPLLGEFDVG DYIVGQCSDK LVIKEEHKPI HHGQGHNLKD 240 VSYFSFKNGK ET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	9e-27	LBD family protein