PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637880.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 737aa    MW: 81920.9 Da    PI: 6.8071
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS122.36e-383657372374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     v+lL +  ea++ g +ela+ +  rl+e   p+g+++qRla y+ +AL ++ +            +e+     ++   a+++f++++P+ +f+h+
  XP_021637880.1 365 VHLLKAYGEAMEIGLKELAEVITLRLKEKGCPTGSTLQRLACYLIQALDKQASF----------LREE---AIINYEIAFSAFYQTFPYGRFAHF 446
                     789999999999999**********************************99887..........3333...4777888999************** PP

            GRAS  97 taNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvlvak 184
                     taN+ Ilea+ ++ e vHi+Dfdi++G+QWp++++aLa + ++   +R T ++ +e++        ++ eet+  L + A+ +g++++ +    +
  XP_021637880.1 447 TANSVILEAIPEDaEIVHIVDFDIGKGVQWPPIIEALAMQ-GQGVVVRFTSIKWEEEEgssydpPFQSFEETKMLLCEHARYFGLRLKVEE---R 537
                     **********8886889**********************7.55589*******98888899999999********************9887...7 PP

            GRAS 185 rledleleeLrvkp....gEalaVnlvlqlhrlldesvsleserdevLklvk...slsPk....vvvvveqe...adhnse.....sFlerflea 260
                     +l +l+ e+ ++++    gE la n+++ l ++  e+ s++s   e+Lk+ k   +l+ k     +++ +          +      F   f   
  XP_021637880.1 538 DLVSLDNEMKKTNKrgggGEWLAFNCMVGLPHME-ERRSVRS-VIEFLKVAKdsiRLNCKggggTITFGDGIgwgK----GlqgwtGFGYIFEGQ 626
                     899999999988889999***************6.7777777.678888887444466663332466655432222....2344449******** PP

            GRAS 261 leyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                     l  + +l++s+++ ++++  e++i +E  +l +  + ++ ++  +        +  +++l+e+G+ p ++++++  +ak l+r+ +s  y v+ e
  XP_021637880.1 627 LAQFKTLLESIDSHFSHHLrEAKIAIECLFLIPYFSFLIDMQMWK------DISGESRALSEVGLVPWRIRKDNLLEAKELVREGESS-YYVDIE 714
                     ***********999987766999999**9999*999999999998......33344799**************************966.888744 PP

            GRAS 355 ...sgslvlgWkdrpLvsvSaWr 374
                        ++++vlg ++ pLv vS+Wr
  XP_021637880.1 715 gvpQNQMVLGYMGTPLVKVSSWR 737
                     455*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MKDFGGPPAH RYDRDRPTAH RPPETSQRIP RGALSVRTCK ISGKLHGGIY YKVNKACYNC  60
GKIGHFVKDC TSARKSEPFT TAEGSIQGSI PKGSQIVNGG RGRGRGSATG SQGIVNQLEQ  120
SSALARVFLR GRYKLHLGLK IESERKEKIE EFRKIEESTI RVALCIFGPL PKAMQYNPIG  180
SQSASSLCLQ NSSTPQSRAD ASLTETCLKS FVFIFLSVTS NFSLPVALCI FGPLPEAMQY  240
NPIGSQSASS LCLQNSSTPQ SLPQISLYQV TSSTPPCSER DILGEQIKDQ LMVDGVKDFG  300
NCMVSHSSIL PPQEYYCLGD DVELENLHML PIASKHQSMD ICSKQTVSLF FPSDGVEVDD  360
CLSIVHLLKA YGEAMEIGLK ELAEVITLRL KEKGCPTGST LQRLACYLIQ ALDKQASFLR  420
EEAIINYEIA FSAFYQTFPY GRFAHFTANS VILEAIPEDA EIVHIVDFDI GKGVQWPPII  480
EALAMQGQGV VVRFTSIKWE EEEGSSYDPP FQSFEETKML LCEHARYFGL RLKVEERDLV  540
SLDNEMKKTN KRGGGGEWLA FNCMVGLPHM EERRSVRSVI EFLKVAKDSI RLNCKGGGGT  600
ITFGDGIGWG KGLQGWTGFG YIFEGQLAQF KTLLESIDSH FSHHLREAKI AIECLFLIPY  660
FSFLIDMQMW KDISGESRAL SEVGLVPWRI RKDNLLEAKE LVREGESSYY VDIEGVPQNQ  720
MVLGYMGTPL VKVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-23GRAS family protein