PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637882.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 207aa    MW: 24019.1 Da    PI: 10.4747
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF382.2e-123573745
                    HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      rq  +s+R+ g l KA EL +LCd++ ++++fs+ gk
  XP_021637882.1 35 KERQLKYSRRKVGTLNKARELATLCDVDLLLLMFSPAGK 73
                    67999*******************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MVQIRGNAEE LQLLLQESEK MGRKKLRILR LECAKERQLK YSRRKVGTLN KARELATLCD  60
VDLLLLMFSP AGKPSLYIGH DKDLSTVLER LANLTIEERE QRRIYTMKLL KKEYSKANTT  120
VDTGNILLDT HRAEAVKFGS SQLQRHQLGE LKQKLTEKMN ILRDWKNPFN VDNLAQIKIM  180
EERLIATLHS IKNRKKVAEH LQSQTVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.16e-18M-type_MADS family protein