PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637950.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 242aa    MW: 26723.3 Da    PI: 6.8575
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26094.98.9e-304107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C++dC+++p++      ++q++++ +++k++G++ +++l++a p++ r++++ssl+yeA+ r+ +PvyG+vg+++++++  +q+
  XP_021637950.1   4 SCNGCRVLRKGCSDDCAIRPCLqwiksSDSQANATLFLAKFYGRAGLINLIEAGPPHLRPAVFSSLLYEACGRIVNPVYGSVGLLWSGNWAHCQA 98 
                     6*********************9998777889*************************************************************** PP

          DUF260  91 kaelallke 99 
                     +++++l+++
  XP_021637950.1  99 AVDAVLRGT 107
                     *99988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MRMSCNGCRV LRKGCSDDCA IRPCLQWIKS SDSQANATLF LAKFYGRAGL INLIEAGPPH  60
LRPAVFSSLL YEACGRIVNP VYGSVGLLWS GNWAHCQAAV DAVLRGTPIM QKPSAPDAPP  120
SHLVDPLKTY DIRHVSKDPN SHELNKVKNR ARFKRPVSSP ISPSESMRRV KHGELSFEPL  180
REPWLSQLAN GDISRDDESM FSFETEEDVN HSEPNRALQF SSLSDDGDEA DLDLALGPVP  240
VK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.14e-79LBD family protein