PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021638011.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 529aa    MW: 58708.1 Da    PI: 5.0654
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021638011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS459.52e-1401595291374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L +cA+av+++d+  +++l+++l++++s +g+p+qRlaay++e+L arla+s+s++ykal+++e +   s+e l+++++++ev+P++kf++
  XP_021638011.1 159 LKEALCACAQAVANNDMLTVEWLMTELRQMVSVSGEPIQRLAAYMLEGLVARLASSGSSIYKALRCKEPA---SAELLSYMHILYEVCPYFKFGY 250
                     5789*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e++vHiiDf+i+qG QW++L+qaLa+Rp+gpp++R+Tg+++++s   +   l  +g+rL+++Ae+++vpfef++ +a + ++
  XP_021638011.1 251 MSANGAIAEAMKDESKVHIIDFQITQGSQWVTLIQALAARPGGPPHIRLTGIDDSTSAyaRGGGLDVVGKRLSRLAESCNVPFEFHA-AAVSASE 344
                     ******************************************************998899999************************.899**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L ++pgEa+aVn++l lh+l+desv ++++rd++L+l kslsPkvv++veqe+++n+++Fl rf+e+l+yy a+f+s++++lpre++eri
  XP_021638011.1 345 IQLENLGIQPGEAIAVNFALTLHHLPDESVGTQNHRDRLLRLAKSLSPKVVTLVEQESNTNTAPFLPRFTETLNYYLAVFESIDVTLPREHKERI 439
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+re+vn++acegaer+erhe l+kWr+r+ +a F+p+pls+++++++k+ll+ ++++ y++ee++g+l+lgW++rpL++ +aWr
  XP_021638011.1 440 NVEQHCLAREVVNIIACEGAERVERHEPLGKWRSRFAMAAFTPYPLSTYVNATIKTLLESYSNK-YTLEERDGALYLGWMNRPLIASCAWR 529
                     **************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MDGSHSFYDQ TMQGRESYCW HPNQNLDQYP FSDDGSQEMH LSADTFEQHC TLESSSGAGS  60
YPVNNSPSTA SFSPNESAIS QLNSQSCLLD LHDSSENTSG SPDRGSYVSH KLRELENVML  120
GPVDDLDMYN IMTQAGCNHI TSEEEKFKFL VGVMSRGDLK EALCACAQAV ANNDMLTVEW  180
LMTELRQMVS VSGEPIQRLA AYMLEGLVAR LASSGSSIYK ALRCKEPASA ELLSYMHILY  240
EVCPYFKFGY MSANGAIAEA MKDESKVHII DFQITQGSQW VTLIQALAAR PGGPPHIRLT  300
GIDDSTSAYA RGGGLDVVGK RLSRLAESCN VPFEFHAAAV SASEIQLENL GIQPGEAIAV  360
NFALTLHHLP DESVGTQNHR DRLLRLAKSL SPKVVTLVEQ ESNTNTAPFL PRFTETLNYY  420
LAVFESIDVT LPREHKERIN VEQHCLAREV VNIIACEGAE RVERHEPLGK WRSRFAMAAF  480
TPYPLSTYVN ATIKTLLESY SNKYTLEERD GALYLGWMNR PLIASCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein