PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638029.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 793aa MW: 87905.4 Da PI: 6.6415

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4e-09	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I r+++ + q++++++ + XP_021638029.1 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
MEMESQISLD SKVNSRIENT SIQHGDTGVT SLIPDHVEPQ LPAKKPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LETQLLKDRK KNVRKRPSQV ENGPATVTNT 180 VTSQNRASAH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRSNRGD SSAMKPARQR 240 RKQAAYKKWE KAAIAGVSLV ADAAEHLERT ATDKEIEHDH SMAEHKSPDP IEKDLPPLPA 300 FAQNHYVESN TQTNMKLKLQ LFPIDDGTRR ALEMDKHNPH LELTLSARKK ISSVLEHLNR 360 KWGNSSIASG ELMLFPYSAH RENFVGYQRW TQDTIVSAAD VHTSIGSPPV FRLRYGWFSN 420 IELASGTLQA PSASSYIPGG NTVDAENEKI KIVDSVSTSG LSTNDKSEKN IGLCEDHLST 480 GNKSHASVPL ATNMPNDPSG HIATGPRNNV VGSSDSARVS WHEKETGDRT IMKQLDDADD 540 MRLSSGTALS AGEWADSLTN ISVGDLLSEV PHDVDPNCIE PPVAQSGQCL QQIPFSCDSF 600 DAAIAAHISR HENKMIFPST VASLSSSIWD AEETCDAFSF QKNHALYQEV PTSIDVVSPG 660 TDKRTNSMFY GAFLEGLANG EGHVDYPTET DPMDECSPDP HVVDNSVKDF TGLTDIYWPE 720 SLGPLDLDIP SSKYHSEEFI LGDSLSGLNR LIASSLDAFQ NCSFFGLDKK DSMPVVEARE 780 SSSFSDFKIG SGV

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

MEMESQISLD SKVNSRIENT SIQHGDTGVT SLIPDHVEPQ LPAKKPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LETQLLKDRK KNVRKRPSQV ENGPATVTNT  180
VTSQNRASAH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRSNRGD SSAMKPARQR  240
RKQAAYKKWE KAAIAGVSLV ADAAEHLERT ATDKEIEHDH SMAEHKSPDP IEKDLPPLPA  300
FAQNHYVESN TQTNMKLKLQ LFPIDDGTRR ALEMDKHNPH LELTLSARKK ISSVLEHLNR  360
KWGNSSIASG ELMLFPYSAH RENFVGYQRW TQDTIVSAAD VHTSIGSPPV FRLRYGWFSN  420
IELASGTLQA PSASSYIPGG NTVDAENEKI KIVDSVSTSG LSTNDKSEKN IGLCEDHLST  480
GNKSHASVPL ATNMPNDPSG HIATGPRNNV VGSSDSARVS WHEKETGDRT IMKQLDDADD  540
MRLSSGTALS AGEWADSLTN ISVGDLLSEV PHDVDPNCIE PPVAQSGQCL QQIPFSCDSF  600
DAAIAAHISR HENKMIFPST VASLSSSIWD AEETCDAFSF QKNHALYQEV PTSIDVVSPG  660
TDKRTNSMFY GAFLEGLANG EGHVDYPTET DPMDECSPDP HVVDNSVKDF TGLTDIYWPE  720
SLGPLDLDIP SSKYHSEEFI LGDSLSGLNR LIASSLDAFQ NCSFFGLDKK DSMPVVEARE  780
SSSFSDFKIG SGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	0.0	MYB_related family protein