PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638190.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 486aa MW: 52810.4 Da PI: 7.8056

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.4	7e-14	22	61	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 + k+CnCk+s Clk+YCeCfaag +C+ C+C +C+N+ e+ XP_021638190.1 22 KIKHCNCKNSLCLKLYCECFAAGLHCNG-CSCLNCHNNVEN 61 679***********************.******9875 PP
2	TCR	51.2	2.6e-16	106	145	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN+e XP_021638190.1 106 KHNKGCHCKKSGCLKKYCECFQANILCSNNCKCMDCKNSE 145 589***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MQESPGSVPR NDVEAKDCTP KKIKHCNCKN SLCLKLYCEC FAAGLHCNGC SCLNCHNNVE 60 NEGARQKAVG ATLERNPNAF RPKIASSPHG SLDGREDARG AQMTGKHNKG CHCKKSGCLK 120 KYCECFQANI LCSNNCKCMD CKNSEGSEER KSLFHGNHNS IGCIQQTENA DVTGAIGSSG 180 YCTPIASKKR KSKEILGSVT KDQSAKYQQE SHVKNSAASS SPLSIPVSHS TTATVLGASK 240 FRYKSPLSGI LQPQDVKEIC SLLVILSQEA KRELAGKMDR QPEVENNHNF EPTSASREDS 300 GHDVHRTLPD DCVNGSKAGR ERNNASGIDG IDMENGMPAS PEIDLMCHEQ EMVFMEAGPP 360 IRMGGLCQNK TRISSNKHEC SEVYAEQERL ILTSFRDFLN RLITCGSIKE TMYSPSAKAK 420 MGNQQEPAER EDIYAGTEIG NHKKSYSNGD AKSSIVATSA SNGVLPIMSA FPVKNSNTEI 480 NPESKS

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MQESPGSVPR NDVEAKDCTP KKIKHCNCKN SLCLKLYCEC FAAGLHCNGC SCLNCHNNVE  60
NEGARQKAVG ATLERNPNAF RPKIASSPHG SLDGREDARG AQMTGKHNKG CHCKKSGCLK  120
KYCECFQANI LCSNNCKCMD CKNSEGSEER KSLFHGNHNS IGCIQQTENA DVTGAIGSSG  180
YCTPIASKKR KSKEILGSVT KDQSAKYQQE SHVKNSAASS SPLSIPVSHS TTATVLGASK  240
FRYKSPLSGI LQPQDVKEIC SLLVILSQEA KRELAGKMDR QPEVENNHNF EPTSASREDS  300
GHDVHRTLPD DCVNGSKAGR ERNNASGIDG IDMENGMPAS PEIDLMCHEQ EMVFMEAGPP  360
IRMGGLCQNK TRISSNKHEC SEVYAEQERL ILTSFRDFLN RLITCGSIKE TMYSPSAKAK  420
MGNQQEPAER EDIYAGTEIG NHKKSYSNGD AKSSIVATSA SNGVLPIMSA FPVKNSNTEI  480
NPESKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-122	CPP family protein