PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021638261.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 327aa    MW: 36312.5 Da    PI: 5.234
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021638261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.61.6e-141966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_021638261.1 19 KGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 66
                     678*******************************************97 PP
2Myb_DNA-binding52.41.2e-1672115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_021638261.1  72 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 115
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MRKPEASGKN NNNNNKLRKG LWSPEEDDKL MNYMLNNGQG CWSDVARNAG LQRCGKSCRL  60
RWINYLRPDL KRGAFSPQEE ELIIHLHSLL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR  120
LKNLSSSASP NTSNSSSEPS KEVAAALGEG FISMQEQSMT PMYIYPSLSS SSSSNTSMQA  180
MFLNQMMDPL PTFDHGLSTC GASVYFNNDA PPCMTHIGVS GDDIYGNQGI LGGVNIGIEG  240
ELHIPPLESI SIEENAKTED MYGSNNNKYP YSNVNRINSN CNNNTKAESM TTGVGRQGEE  300
LKVGDWDLEE LMKDVSSFPF LDIFQAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.13e-67MYB family protein