PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638314.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 411aa MW: 46832.4 Da PI: 6.0975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.9	2.3e-22	80	176	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++ v++Li+++ +++++ + +kk++W++vsk m ++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ ++ d XP_021638314.1 80 KWTDNVVRLLIAVVAYVGDDGAFEGveglkrksgilQKKGKWKSVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVEKPALMD 174 7*************99999976445667778888********************************************5689998888888 PP trihelix 84 ql 85 ++ XP_021638314.1 175 SM 176 77 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MNLVGGHEND HQTIGLMEVK GSIPKGYSVV FSKGKAVSPF NATNNGSVSE DDEPSFTEDG 60 NGENTSGAKG KKGSPWQRMK WTDNVVRLLI AVVAYVGDDG AFEGVEGLKR KSGILQKKGK 120 WKSVSKIMIS KGCHVSPQQC EDKFNDLNKR YKRLNDILGR GTSCRVVEKP ALMDSMPHLS 180 AKSKDDVRKI LSSKHLFYRE MCAYHNGQRI PDCQDIDLQG CSLPLERCSR DNNGSEEEEA 240 GGHDDSDDDE SDNESDLNAY EDGERMGKYE KNKVNEEDDH LWAQSGLCNG FEVEMSGILQ 300 DPMVSLWEKK EWIKKQKLQL LEQRVSIQAQ AGELEKRRFK WLRYCSKKDR EFDRLRLENE 360 RMRLENEQSI LQLRQKQLEM DFRSSETSRD LTSLGIDRTQ GRGQIDLDRH Q

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MNLVGGHEND HQTIGLMEVK GSIPKGYSVV FSKGKAVSPF NATNNGSVSE DDEPSFTEDG  60
NGENTSGAKG KKGSPWQRMK WTDNVVRLLI AVVAYVGDDG AFEGVEGLKR KSGILQKKGK  120
WKSVSKIMIS KGCHVSPQQC EDKFNDLNKR YKRLNDILGR GTSCRVVEKP ALMDSMPHLS  180
AKSKDDVRKI LSSKHLFYRE MCAYHNGQRI PDCQDIDLQG CSLPLERCSR DNNGSEEEEA  240
GGHDDSDDDE SDNESDLNAY EDGERMGKYE KNKVNEEDDH LWAQSGLCNG FEVEMSGILQ  300
DPMVSLWEKK EWIKKQKLQL LEQRVSIQAQ AGELEKRRFK WLRYCSKKDR EFDRLRLENE  360
RMRLENEQSI LQLRQKQLEM DFRSSETSRD LTSLGIDRTQ GRGQIDLDRH Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	4e-82	Trihelix family protein