PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638316.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 330aa MW: 36863.2 Da PI: 7.3471

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.6e-05	172	191	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_021638316.1 172 FSCPLCFKTFNRYNNMQMHM 191 89*****************9 PP
2	zf-C2H2	15.7	4.4e-05	256	278	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_021638316.1 256 FTCRKCGKAFAVRGDWRTHEKNC 278 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MADPYSNYFN GSYNLNHLHH LSSTASSSNP SLYASSGCNM LSDNIINNSN HSFIHYQNSS 60 SPPSPPVKEA LPLLSLCPTR HDDQQESSCS ATEEDKNKDK EGSLFDDEAM IVALHLGLPS 120 PTSADLISSL SSAEICSDKE VTVASGYQTT SLNKGQYWIP TPAQILIGPT QFSCPLCFKT 180 FNRYNNMQMH MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAPGCRNNID HPRSKPLKDF 240 RTLQTHYKRK HGIKPFTCRK CGKAFAVRGD WRTHEKNCGK LWYCTCGSDF KHKRSLKDHI 300 KSFGHGHAAC GIDSFDEEEE PASEIEQDNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51220.1	1e-133	C2H2 family protein