PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638555.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 368aa MW: 40533.5 Da PI: 8.2776

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.5e-17	180	234	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021638555.1 180 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 234 778899***********************************************98 PP
2	HD-ZIP_I/II	127.7	4.8e-41	180	270	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_021638555.1 180 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 270 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MELALSLGDT SKPFKFLDQT PKISTKDPGF CMGLETGFTA TPRFQDKVVD STLQGEAAAD 60 DTRASSDLPV QLNLLPFSPV PRRRQVPSQI PFPWLSDNLV SEPGSTDGSG RGFDVNRLSA 120 EEAEEGAALS SPNSAMSSFQ MDFGIRSSGG GRCNKRDMEA IEAERASSRA SDDEENGLTR 180 KKLRLSKEQS AFLEESFKEH NTLNPKQKLA LAKQLNLRPR QVEVWFQNRR ARTKLKQTEV 240 DCEYLKRCCE TLTEENRRLQ KELQELRALK TSQPFYMQLP ATTLTMCPSC ERVATTTASS 300 SATTNTNATG NNKQPLATTA AAAIIPLTTT TSNTNSTSLS LANKPRLYPF TTQVHMPQAQ 360 AQTHQATS

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MELALSLGDT SKPFKFLDQT PKISTKDPGF CMGLETGFTA TPRFQDKVVD STLQGEAAAD  60
DTRASSDLPV QLNLLPFSPV PRRRQVPSQI PFPWLSDNLV SEPGSTDGSG RGFDVNRLSA  120
EEAEEGAALS SPNSAMSSFQ MDFGIRSSGG GRCNKRDMEA IEAERASSRA SDDEENGLTR  180
KKLRLSKEQS AFLEESFKEH NTLNPKQKLA LAKQLNLRPR QVEVWFQNRR ARTKLKQTEV  240
DCEYLKRCCE TLTEENRRLQ KELQELRALK TSQPFYMQLP ATTLTMCPSC ERVATTTASS  300
SATTNTNATG NNKQPLATTA AAAIIPLTTT TSNTNSTSLS LANKPRLYPF TTQVHMPQAQ  360
AQTHQATS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	185	TRKKLRL
2	229	237	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	5e-79	HD-ZIP family protein