PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638556.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 360aa MW: 39810.7 Da PI: 8.6719

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.9	1.4e-17	172	226	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021638556.1 172 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 226 778899***********************************************98 PP
2	HD-ZIP_I/II	127.8	4.6e-41	172	262	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_021638556.1 172 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 262 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MELALSLGDT SKPFKFLDQT PKISTKDPGF CMGLETGFTA TPRFQDKVVD STLQGEAAAD 60 DTRASSDLPV QLNLLPFSPV PRRRQVPSQI PFPWLSDNYG SGRGFDVNRL SAEEAEEGAA 120 LSSPNSAMSS FQMDFGIRSS GGGRCNKRDM EAIEAERASS RASDDEENGL TRKKLRLSKE 180 QSAFLEESFK EHNTLNPKQK LALAKQLNLR PRQVEVWFQN RRARTKLKQT EVDCEYLKRC 240 CETLTEENRR LQKELQELRA LKTSQPFYMQ LPATTLTMCP SCERVATTTA SSSATTNTNA 300 TGNNKQPLAT TAAAAIIPLT TTTSNTNSTS LSLANKPRLY PFTTQVHMPQ AQAQTHQATS

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MELALSLGDT SKPFKFLDQT PKISTKDPGF CMGLETGFTA TPRFQDKVVD STLQGEAAAD  60
DTRASSDLPV QLNLLPFSPV PRRRQVPSQI PFPWLSDNYG SGRGFDVNRL SAEEAEEGAA  120
LSSPNSAMSS FQMDFGIRSS GGGRCNKRDM EAIEAERASS RASDDEENGL TRKKLRLSKE  180
QSAFLEESFK EHNTLNPKQK LALAKQLNLR PRQVEVWFQN RRARTKLKQT EVDCEYLKRC  240
CETLTEENRR LQKELQELRA LKTSQPFYMQ LPATTLTMCP SCERVATTTA SSSATTNTNA  300
TGNNKQPLAT TAAAAIIPLT TTTSNTNSTS LSLANKPRLY PFTTQVHMPQ AQAQTHQATS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	177	TRKKLRL
2	221	229	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-78	HD-ZIP family protein