PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638636.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 367aa MW: 40281 Da PI: 6.6166

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.5	1.5e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W++I+++ g+ R++k+c++rw +yl XP_021638636.1 14 RGLWSPEEDEKLINYISTYGHGCWSSIPKHAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	48.9	1.5e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l+v+++ lG++ W+ Ia++++ gRt++++k++w+ XP_021638636.1 67 RGSFSPQEAALIVELHSILGNR-WAQIAKHLP-GRTDNEVKNFWN 109 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSI PKHAGLQRCG KSCRLRWINY 60 LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLICHD 120 VPGLATFADV HNPSGGSEEA FFSLTGNPNL ILSTAQQDQH YLPSPASMLQ SFGQGDVKFN 180 QSNNYNLDLA NFTPSIIPSP LNNSSSSLDP MWALPYPPQH LDPSHEEDQI LSNGTGPHYT 240 GDHKFSQDQA IAIMTNYENQ GMLPMMPKLS EIIEGSVCCN IQSSSSSSAA SREVLIDPVA 300 RLPCFPSGSY NPHEVPTNQM EYIDAIMSSL PSSSSSSSLS AFSSGQFGAN PNNNNVNNLP 360 SSCSWNA

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGHHSCCNKQ KVKRGLWSPE EDEKLINYIS TYGHGCWSSI PKHAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SPQEAALIVE LHSILGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLICHD  120
VPGLATFADV HNPSGGSEEA FFSLTGNPNL ILSTAQQDQH YLPSPASMLQ SFGQGDVKFN  180
QSNNYNLDLA NFTPSIIPSP LNNSSSSLDP MWALPYPPQH LDPSHEEDQI LSNGTGPHYT  240
GDHKFSQDQA IAIMTNYENQ GMLPMMPKLS EIIEGSVCCN IQSSSSSSAA SREVLIDPVA  300
RLPCFPSGSY NPHEVPTNQM EYIDAIMSSL PSSSSSSSLS AFSSGQFGAN PNNNNVNNLP  360
SSCSWNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	1e-82	MYB family protein