PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021638983.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 607aa    MW: 66833.5 Da    PI: 4.8999
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021638983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS365.29.3e-1122406072374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++LlecA+  + ++ e+a + L +++e +s++gdp++R+a+yfteAL  r++    +  k+l++ +t+    ++ + ++k++++++P+ kf+hl
  XP_021638983.1 240 LKALLECARLAE-SEPEKAVKSLIKVRESVSEQGDPTERVAFYFTEALYGRVSL---QADKSLTMFDTT---CEDFTLSYKALNDACPYSKFAHL 327
                     689******655.578888889999****************************9...777778888887...99999****************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p  g     +l +tg+rL++fA+ l+++fef++ + + +++
  XP_021638983.1 328 TANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRSAGKPaRIRISGIPAPVLGksPGASLFATGNRLRDFAKLLDLNFEFEP-ILTPIHE 421
                     ****************************************66555*********9988889999***********************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++rv+p+E+laVn++lql++llde+    +   + L++ ksl+Pk+v++ e ea +n+  +++rf +al+yysalf+sle +l+r+s er 
  XP_021638983.1 422 LNESSFRVDPDEVLAVNFMLQLYNLLDETPVGVE---TALRMAKSLNPKIVTLGEYEACLNRIGYVNRFKNALRYYSALFESLEPNLSRDSPERL 513
                     **************************88877776...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      vE+ llgr+i  v+  e+a  rrer e +e+Wr  +e++GF++v+ls++a++qak ll +++ s  y++ e++  ++ l Wk+ pL++vS+Wr
  XP_021638983.1 514 QVEKLLLGRRIAGVIGPEEAGtRRERIEDKEQWRILMESCGFESVALSHYAMSQAKILLWNYNySSLYSLVESQPGFLsLAWKELPLLTVSSWR 607
                     ****************999877*****************************************9999****99999888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ QHHHHQQQQL LGLNSFPLNP WPPTMSTSPN  60
LGYTGIAAAG FTDPFQVPSG GDTGEPGFQF PQMEHHSTGF RFSDFSAGAS AEFDSDEWMD  120
SLMGGGDSTD SSNLPSSCDA WQNNADFSLY GPDPFATCPT RLSVACPSPS DLNRAIFTET  180
QKSPNPLQVQ AWGPSPPPPP PQVVVKDTKL ANPPPPSTLK NEGVGASSSS PEIESAPALL  240
KALLECARLA ESEPEKAVKS LIKVRESVSE QGDPTERVAF YFTEALYGRV SLQADKSLTM  300
FDTTCEDFTL SYKALNDACP YSKFAHLTAN QAILEATERA SKIHIVDFGI VQGVQWAALL  360
QALATRSAGK PARIRISGIP APVLGKSPGA SLFATGNRLR DFAKLLDLNF EFEPILTPIH  420
ELNESSFRVD PDEVLAVNFM LQLYNLLDET PVGVETALRM AKSLNPKIVT LGEYEACLNR  480
IGYVNRFKNA LRYYSALFES LEPNLSRDSP ERLQVEKLLL GRRIAGVIGP EEAGTRRERI  540
EDKEQWRILM ESCGFESVAL SHYAMSQAKI LLWNYNYSSL YSLVESQPGF LSLAWKELPL  600
LTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein