PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639067.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 512aa MW: 56908.1 Da PI: 8.6962

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	21	75	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ q+ +Le+++++++yp++e++ eLAk+++Lte+q++ WF+ rR k+k+ XP_021639067.1 21 KRILKTPAQIMALEKFYNEHNYPTEEMKSELAKQIRLTEKQISSWFCHRRLKDKR 75 78889************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MEDSSEVHSE ENGVSPEKNA KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAKQIRLTEK 60 QISSWFCHRR LKDKRLSKDE TFDRRLSKDD ACANGRQDRS SGLIQDRGSG LWQDSCGSTK 120 QGDYRKVDPK EVESHRLYGH SLPAADVNYD RTSRYTGNVN GVDDTSSESS SSLQDKLFSQ 180 SEDPHDVKTS SYVTQNGASR PSIPKGANNM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY 240 REDGPPLGVE FQPLPPGAFS SSSRDPVDGA FCVGDPARIH SSDVSGVRKQ SSISSRYEVY 300 SSKMISQDSY MEGPNCDLNN ASDSHEKKSR HQLKQKSTSC KFSNSTPGGK SATDNYDDLA 360 AEISIHSGKR NYKLSSKHGA EGIMPDIVSN HHHPDGGKVI SEQTDPWLNA YGNGSPNIVQ 420 KNDCMSKPSN LIPGSSKSLD AQERVLSTRM TKEKLYGEKK GTKEYQDPVR VMKRFKAEFS 480 QECVAKAAFP NMPRNTNSNK GLICHGEAIQ FQ

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MEDSSEVHSE ENGVSPEKNA KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAKQIRLTEK  60
QISSWFCHRR LKDKRLSKDE TFDRRLSKDD ACANGRQDRS SGLIQDRGSG LWQDSCGSTK  120
QGDYRKVDPK EVESHRLYGH SLPAADVNYD RTSRYTGNVN GVDDTSSESS SSLQDKLFSQ  180
SEDPHDVKTS SYVTQNGASR PSIPKGANNM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY  240
REDGPPLGVE FQPLPPGAFS SSSRDPVDGA FCVGDPARIH SSDVSGVRKQ SSISSRYEVY  300
SSKMISQDSY MEGPNCDLNN ASDSHEKKSR HQLKQKSTSC KFSNSTPGGK SATDNYDDLA  360
AEISIHSGKR NYKLSSKHGA EGIMPDIVSN HHHPDGGKVI SEQTDPWLNA YGNGSPNIVQ  420
KNDCMSKPSN LIPGSSKSLD AQERVLSTRM TKEKLYGEKK GTKEYQDPVR VMKRFKAEFS  480
QECVAKAAFP NMPRNTNSNK GLICHGEAIQ FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	7e-85	HB-other family protein