PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639584.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 461aa MW: 48653.1 Da PI: 6.8875

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	253	298	5	55
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+ + K +Ka++L + ++Y+k Lq XP_021639584.1 253 HSIAERLRRERIAERMKALQELVPNgN------KTDKASMLDEIIDYVKFLQ 298 99*********************55......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS 60 SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ 120 ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTRGDGS VQALYNNGFG 180 AGSMHGTGQA SNQSQQHFHH PQEGSLQAQN FSTPGAGAGM AMNQPQASGS TGGAPAQPRQ 240 RVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNGNK TDKASMLDEI IDYVKFLQLQ 300 VKVLSMSRLG GAAAVAPLVA DMSSEGRGGA GGGGDCIQAT ANGGSLPRTN SNSTQTPSSN 360 DTLTVTEHQV ARLMEEDMGS AMQYLQGKGL CLMPISLATA ISTTTSHSRN PVLNSNHHPL 420 LHSNGEGPSS PSMSVLTVQS ATMGNGRGDA SVKDAASVSK P

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS  60
SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ  120
ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTRGDGS VQALYNNGFG  180
AGSMHGTGQA SNQSQQHFHH PQEGSLQAQN FSTPGAGAGM AMNQPQASGS TGGAPAQPRQ  240
RVRARRGQAT DPHSIAERLR RERIAERMKA LQELVPNGNK TDKASMLDEI IDYVKFLQLQ  300
VKVLSMSRLG GAAAVAPLVA DMSSEGRGGA GGGGDCIQAT ANGGSLPRTN SNSTQTPSSN  360
DTLTVTEHQV ARLMEEDMGS AMQYLQGKGL CLMPISLATA ISTTTSHSRN PVLNSNHHPL  420
LHSNGEGPSS PSMSVLTVQS ATMGNGRGDA SVKDAASVSK P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	263	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-45	bHLH family protein