PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639586.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 425aa MW: 44918.2 Da PI: 6.856

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	217	262	5	55
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+ + K +Ka++L + ++Y+k Lq XP_021639586.1 217 HSIAERLRRERIAERMKALQELVPNgN------KTDKASMLDEIIDYVKFLQ 262 99*********************55......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS 60 SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ 120 ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTREGSL QAQNFSTPGA 180 GAGMAMNQPQ ASGSTGGAPA QPRQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP 240 NGNKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAAVA PLVADMSSEG RGGAGGGGDC 300 IQATANGGSL PRTNSNSTQT PSSNDTLTVT EHQVARLMEE DMGSAMQYLQ GKGLCLMPIS 360 LATAISTTTS HSRNPVLNSN HHPLLHSNGE GPSSPSMSVL TVQSATMGNG RGDASVKDAA 420 SVSKP

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MHPCSREMQG INYVLNPSSQ IPLQDLQNQQ HQQIQNSPFD PSSSSNDDFL DQMLSSLPSS  60
SWADLKSPWD LNPPTSLNIP INNSSAKPRE DETPPSIPEN VGFHNFDESV ILAAKLRQHQ  120
ISGGPSPAVA AAAKAMLQQQ LMMATRGGGL PQNDVVDGSS FKCPTREGSL QAQNFSTPGA  180
GAGMAMNQPQ ASGSTGGAPA QPRQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP  240
NGNKTDKASM LDEIIDYVKF LQLQVKVLSM SRLGGAAAVA PLVADMSSEG RGGAGGGGDC  300
IQATANGGSL PRTNSNSTQT PSSNDTLTVT EHQVARLMEE DMGSAMQYLQ GKGLCLMPIS  360
LATAISTTTS HSRNPVLNSN HHPLLHSNGE GPSSPSMSVL TVQSATMGNG RGDASVKDAA  420
SVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	227	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-45	bHLH family protein