PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639753.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 438aa MW: 49155.6 Da PI: 7.7146

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_021639753.1 14 KGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	41.8	2.6e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_021639753.1 67 RGAFSQQEENLIIELHGVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQQEENLIIE LHGVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLSQRG 120 IDPNTHKPLS EVENDYKEKQ STKNKNNEKA STVSNVNELN LIEPANSKPS TVSSNSKITS 180 NNDHNSNLTP TALTQEFFLD RFATSYESST TSCRPSDLMG YFPFQKLSYK PTMGLSVNPN 240 TSICFNSNCS SSEIISEFDS CMTPTILPSL SSSMFQTPIR VTPSVSLPSD NPNSVGSCEV 300 SGIQNWEASS FSNNGSSCSN GSSSSIELQN NSTFFETNTF SWEEAHLRSV ENDQAFIKWS 360 EYLSTPFLIG TTAVQNQTSR PMYSEVKPET HFITEGSSTS WQQNHHHHQY HHHPQASQPS 420 NIYAKDLQRL AVAFGQTL

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQQEENLIIE LHGVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLSQRG  120
IDPNTHKPLS EVENDYKEKQ STKNKNNEKA STVSNVNELN LIEPANSKPS TVSSNSKITS  180
NNDHNSNLTP TALTQEFFLD RFATSYESST TSCRPSDLMG YFPFQKLSYK PTMGLSVNPN  240
TSICFNSNCS SSEIISEFDS CMTPTILPSL SSSMFQTPIR VTPSVSLPSD NPNSVGSCEV  300
SGIQNWEASS FSNNGSSCSN GSSSSIELQN NSTFFETNTF SWEEAHLRSV ENDQAFIKWS  360
EYLSTPFLIG TTAVQNQTSR PMYSEVKPET HFITEGSSTS WQQNHHHHQY HHHPQASQPS  420
NIYAKDLQRL AVAFGQTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-122	MYB family protein