PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639782.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 529aa    MW: 59017.6 Da    PI: 4.5976
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS365.95.6e-1121515221374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.....sseelaalklfsevsPi 90 
                     lv+lLl+cAeav  +d++la+++L+r+   ++p gd++qR+  +f+ +L++rl+   +++ +  + ++ + ++      +e++ a++l+++++P+
  XP_021639782.1 151 LVHLLLACAEAVGCRDTQLANSILCRIWASVNPWGDSLQRVSNCFAIGLKSRLSL-LHNVNANGTFTNGA-MDvslitGEEKMEAFRLLYQTTPY 243
                     68***************************************************98.44444333333333.22356779999************* PP

            GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak. 184
                     + f++++aN+aI +a+ g++ +H iD+++ + lQWp++ ++LasRpegpp++RiTg+++ ++++  ele+  + La+ A++lg+++efn++ ++ 
  XP_021639782.1 244 IAFGFMAANEAICQAARGKDSLHLIDLGMDHTLQWPSFVRTLASRPEGPPKVRITGLVN-NEQNLLELEASMKVLAEDASSLGISLEFNMISEQi 337
                     ***********************************************************.557999************************86667 PP

            GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                     + + l+ e+L++++gEal Vn++++lh++++es  + +   ++L+++k+l+P++++vveq+a+hn++ Fl rfle+l+yysa+fdslea+lpr+s
  XP_021639782.1 338 TPSILTRENLNLREGEALFVNSIMNLHKFVKESRGSLK---AILQAIKKLNPTLLTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEASLPRNS 429
                     8899**************************88777666...9***************************************************** PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++r+k+E+  +++ei+n+va eg++r+erhe++ +Wr++l++aGF+ + l+   ++qa+++l+ ++ dgy++ +e+g+l+lgWk+rp++ +S+W+
  XP_021639782.1 430 QQRMKIEKLHFAEEIRNIVAYEGSDRVERHERADQWRRQLGRAGFQVAGLK--CMSQARMMLSVYGCDGYTLASEKGCLLLGWKGRPIMLASSWQ 522
                     ***********************************************9985..89***************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MEALNGWLSF PMYESLNHDL AIRRFCPARM EQDQGGEWEE TMMNHEFEFL SPSDGTTSTP  60
HLAASEVEEL VDSFINVDQE DKDDDDHPSP EKFQDEQMET FSTADDVFGD VPMLLEGDDE  120
FEMSTGSSSE DSVAVPSVEV ASHGVDQGLH LVHLLLACAE AVGCRDTQLA NSILCRIWAS  180
VNPWGDSLQR VSNCFAIGLK SRLSLLHNVN ANGTFTNGAM DVSLITGEEK MEAFRLLYQT  240
TPYIAFGFMA ANEAICQAAR GKDSLHLIDL GMDHTLQWPS FVRTLASRPE GPPKVRITGL  300
VNNEQNLLEL EASMKVLAED ASSLGISLEF NMISEQITPS ILTRENLNLR EGEALFVNSI  360
MNLHKFVKES RGSLKAILQA IKKLNPTLLT VVEQDANHNG PFFLGRFLES LHYYSAIFDS  420
LEASLPRNSQ QRMKIEKLHF AEEIRNIVAY EGSDRVERHE RADQWRRQLG RAGFQVAGLK  480
CMSQARMMLS VYGCDGYTLA SEKGCLLLGW KGRPIMLASS WQVHNVPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-82GRAS family protein