PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639809.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 269aa MW: 30121.1 Da PI: 6.4177

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	175.2	6.6e-55	86	190	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie++tdfknh+lPlarikki+kadedv+mis+eaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdfl XP_021639809.1 86 QLQVFWANQmqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISSEAPVIFAKACEVFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180 89****988889***************************************************************************** PP NF-YC 93 vdivprdelk 102 vdi+prdelk XP_021639809.1 181 VDIIPRDELK 190 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MDQSEQTQQR QQSHQPQQQP VMGVVAGAGQ MSYATTPYQT AAMMASGTPA IAVASPTQPS 60 SPFSNSPHQL TYQQAQHFHH QRQQQQLQVF WANQMQEIEQ TTDFKNHSLP LARIKKIMKA 120 DEDVRMISSE APVIFAKACE VFILELTLRS WIHTEENKRR TLQKNDIAAA ISRTDVFDFL 180 VDIIPRDELK EEGLGVTKAT IPMVGSPADM PYYYVPPQHP VGPPGMIMGK PVDQAVVCGA 240 QQPRPPVAFM PWPQTQPQQQ EAHQQPSDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	165	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	3e-81	NF-YC family protein