PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640223.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 179aa    MW: 20261.8 Da    PI: 5.4242
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF503.9e-161457245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    +i  k    vtf+kRr+g+l KA EL+vLC+aevav+ f + gk
  XP_021640223.1 14 KITKKQSLDVTFAKRRQGLLNKAGELCVLCGAEVAVVGFYPAGK 57
                    677788889****************************9988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MANEGRRRKI EMKKITKKQS LDVTFAKRRQ GLLNKAGELC VLCGAEVAVV GFYPAGKPFA  60
FGHPSVDNVI DRCLSDSNNN GNVNADQVEK SRKQYMEALA KLEHQKKLLD SISKDHEKEA  120
ASGRDTFWWD DPVESMDSEE LEQYAASLEE LKKNVLVRVD EMEKANNSPS RFLLLEDDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-38M-type_MADS family protein